Streptomyces davaonensis JCM 4913

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces davaonensis JCM 4913 is a bacterium characterized by the presence of flagella, which are structures that enable motility. This motility can be crucial for the organism’s interaction with its environment, potentially aiding in nutrient acquisition and colonization of ecological niches. The genome of S. davaonensis consists of two replicons, which may suggest a complex genetic architecture that could be advantageous for adaptability and resilience in various conditions. The presence of two replicons may also facilitate the regulation of gene expression and the maintenance of genetic stability, both of which are important for survival in diverse habitats. S. davaonensis has genome accessions NC_020504.1 and NC_020545.1, indicating the availability of its genetic information in public databases. This genomic data can be instrumental for further research into its biochemical pathways, ecological roles, and potential applications in biotechnology, such as antibiotic production or bioremediation. In summary, the flagellated nature and unique genomic structure of Streptomyces davaonensis JCM 4913 suggest that it possesses adaptive traits for survival and functionality in varied environments. Understanding these characteristics can provide insight into the ecological roles of this bacterium within its habitat and its potential contributions to microbial diversity and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces davaonensis
StrainJCM 4913

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces davaonensis JCM 4913
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces davaonensis JCM 4913, complete sequence.

Gene Summary

Adenine Count

1395776 bp

Thymine Count

1388250 bp

Guanine Count

3344294 bp

Cytosine Count

3336852 bp

Genome Length

9466619 bp

Protein-coding Genes

8506 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03619 family f420-dependent llm class oxidoreductaseBN159_RS24770Not AvailablePositive5577409 - 557832332961.4
sdr family nad(p)-dependent oxidoreductaseBN159_RS24775Not AvailablePositive5578335 - 557910526873.3
llm class flavin-dependent oxidoreductaseBN159_RS24780Not AvailablePositive5579237 - 558035541779.7
n-acyl-d-amino-acid deacylase family proteinBN159_RS24785Not AvailablePositive5580370 - 558210362299.2
aldehyde dehydrogenase family proteinBN159_RS24790Not AvailablePositive5582100 - 558354550366.0
nitroreductase/quinone reductase family proteinBN159_RS24795Not AvailableNegative5583562 - 558395414839.0
endonuclease/exonuclease/phosphatase family proteinBN159_RS24800Not AvailablePositive5584027 - 558481229328.2
ceha/mcba family metallohydrolaseBN159_RS24805Not AvailableNegative5584889 - 558640053781.9
llm class f420-dependent oxidoreductaseBN159_RS24810Not AvailablePositive5586484 - 558733230491.4
bifunctional fo biosynthesis protein cofghBN159_RS24815Not AvailablePositive5587362 - 558997494850.7

Displaying genes 5081 – 5090 of 8694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039925Aeromonas jandaei Riv2Not available29908-03-0Not available

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.