Streptomyces davaonensis JCM 4913

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces davaonensis JCM 4913 is a bacterium characterized by the presence of flagella, which are structures that enable motility. This motility can be crucial for the organism’s interaction with its environment, potentially aiding in nutrient acquisition and colonization of ecological niches. The genome of S. davaonensis consists of two replicons, which may suggest a complex genetic architecture that could be advantageous for adaptability and resilience in various conditions. The presence of two replicons may also facilitate the regulation of gene expression and the maintenance of genetic stability, both of which are important for survival in diverse habitats. S. davaonensis has genome accessions NC_020504.1 and NC_020545.1, indicating the availability of its genetic information in public databases. This genomic data can be instrumental for further research into its biochemical pathways, ecological roles, and potential applications in biotechnology, such as antibiotic production or bioremediation. In summary, the flagellated nature and unique genomic structure of Streptomyces davaonensis JCM 4913 suggest that it possesses adaptive traits for survival and functionality in varied environments. Understanding these characteristics can provide insight into the ecological roles of this bacterium within its habitat and its potential contributions to microbial diversity and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces davaonensis
StrainJCM 4913

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces davaonensis JCM 4913
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces davaonensis JCM 4913, complete sequence.

Gene Summary

Adenine Count

1395776 bp

Thymine Count

1388250 bp

Guanine Count

3344294 bp

Cytosine Count

3336852 bp

Genome Length

9466619 bp

Protein-coding Genes

8506 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate synthaseBN159_RS11680Not AvailableNegative2688289 - 269020868691.3
sugar abc transporter permeaseBN159_RS11685Not AvailableNegative2690401 - 269170244775.0
atp-binding cassette domain-containing proteinBN159_RS11690Not AvailableNegative2691699 - 269249028122.1
substrate-binding domain-containing proteinBN159_RS11695Not AvailableNegative2692676 - 269377638064.9
rok family transcriptional regulatorBN159_RS11700Not AvailableNegative2693910 - 269510940786.7
carbohydrate abc transporter permeaseBN159_RS11705Not AvailableNegative2695305 - 269622834097.1
carbohydrate abc transporter permeaseBN159_RS11710Not AvailableNegative2696246 - 269717534196.4
n-acetylglucosamine/diacetylchitobiose abc transporter substrate-binding proteinBN159_RS11715Not AvailableNegative2697250 - 269869552303.7
gh92 family glycosyl hydrolaseBN159_RS11720Not AvailablePositive2699042 - 2702830137355.0
alpha-glucuronidaseBN159_RS11725Not AvailablePositive2702847 - 270481171803.3

Displaying genes 2421 – 2430 of 8694 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039925Aeromonas jandaei Riv2Not available29908-03-0Not available

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.