Beta proteobacterium CB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Family

Genus

Description

Beta proteobacterium CB is characterized by a single replicon, which suggests a simpler genomic structure compared to organisms with multiple replicons. Its genomic data is accessible under the accession number NC_020417.1. The presence of a single replicon may influence its replication and stability, potentially resulting in a streamlined genetic process. Such characteristics are often associated with organisms that thrive in specific ecological niches, where efficient replication and maintenance of genetic material can confer advantages in resource-limited environments. While specific metabolic capabilities or environmental preferences of Beta proteobacterium CB are not provided in the evidence, the simplicity of having just one replicon may indicate a specialization in certain ecological roles. This trait could suggest a potential adaptation to particular habitats, possibly allowing the organism to occupy unique ecological niches or contribute to specific biogeochemical cycles. Understanding the genomic structure of Beta proteobacterium CB, especially its single replicon, can offer insights into its evolutionary adaptations and ecological significance. Further research into this organism’s metabolic pathways and environmental interactions would be essential to fully appreciate its role within its ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Beta proteobacterium CB, complete sequence.

Gene Summary

Adenine Count

550730 bp

Thymine Count

552140 bp

Guanine Count

470207 bp

Cytosine Count

472643 bp

Genome Length

2045720 bp

Protein-coding Genes

2053 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pantoate--beta-alanine ligaseD521_RS02530Not AvailableNegative473321 - 47417231915.6
segregation and condensation protein aD521_RS02535Not AvailableNegative474169 - 47503833152.1
duf3460 family proteinD521_RS02540Not AvailableNegative475031 - 4752197287.52
methionine--trna ligaseD521_RS02545Not AvailableNegative475370 - 47704063442.5
formate dehydrogenase accessory sulfurtransferase fdhdD521_RS02550Not AvailablePositive477175 - 47801730706.3
dctp deaminaseD521_RS02555Not AvailablePositive478059 - 47862520901.8
arginine/lysine/ornithine decarboxylaseD521_RS02560Not AvailablePositive478665 - 48093285805.5
trap transporter large permease subunitD521_RS02565Not AvailableNegative480973 - 48250555079.0
trap transporter small permease subunitD521_RS02570Not AvailableNegative482502 - 48305320638.6
argininosuccinate lyaseD521_RS02575Not AvailableNegative483059 - 48447751881.2

Displaying genes 511 – 520 of 2096 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

178 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da

Displaying 1–10 of 178 metabolites

Health Effects

No health effects information available for this bacterium.