Beta proteobacterium CB

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Family

Genus

Description

Beta proteobacterium CB is characterized by a single replicon, which suggests a simpler genomic structure compared to organisms with multiple replicons. Its genomic data is accessible under the accession number NC_020417.1. The presence of a single replicon may influence its replication and stability, potentially resulting in a streamlined genetic process. Such characteristics are often associated with organisms that thrive in specific ecological niches, where efficient replication and maintenance of genetic material can confer advantages in resource-limited environments. While specific metabolic capabilities or environmental preferences of Beta proteobacterium CB are not provided in the evidence, the simplicity of having just one replicon may indicate a specialization in certain ecological roles. This trait could suggest a potential adaptation to particular habitats, possibly allowing the organism to occupy unique ecological niches or contribute to specific biogeochemical cycles. Understanding the genomic structure of Beta proteobacterium CB, especially its single replicon, can offer insights into its evolutionary adaptations and ecological significance. Further research into this organism’s metabolic pathways and environmental interactions would be essential to fully appreciate its role within its ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Beta proteobacterium CB, complete sequence.

Gene Summary

Adenine Count

550730 bp

Thymine Count

552140 bp

Guanine Count

470207 bp

Cytosine Count

472643 bp

Genome Length

2045720 bp

Protein-coding Genes

2053 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c-type cytochromeD521_RS00450Not AvailablePositive73700 - 7442224977.8
diaminopimelate decarboxylaseD521_RS00455Not AvailableNegative74517 - 7581546571.8
lps translocon maturation chaperone lptmD521_RS10635Not AvailableNegative75812 - 760036546.17
iron donor protein cyayD521_RS00460Not AvailablePositive76051 - 7643414128.7
3-dehydroquinate synthaseD521_RS00465Not AvailableNegative76454 - 7753638859.2
shikimate kinaseD521_RS00470Not AvailableNegative77545 - 7806919315.6
secretin and tonb n-terminal domain-containing proteinD521_RS00475Not AvailableNegative78082 - 7910737214.8
hypothetical proteinD521_RS00480Not AvailableNegative79200 - 7988025337.1
penicillin-binding protein 1aD521_RS00485Not AvailablePositive80021 - 8235786370.9
transposaseD521_RS00490Not AvailablePositive82370 - 8307427251.4

Displaying genes 91 – 100 of 2096 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

178 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da

Displaying 1–10 of 178 metabolites

Health Effects

No health effects information available for this bacterium.