Nonlabens dokdonensis DSW-6

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens dokdonensis DSW-6 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species is non-motile and does not form spores, which may influence its ecological interactions and survival strategies in its natural habitat. The optimal growth temperature for N. dokdonensis DSW-6 is 25°C, placing it within the mesophilic temperature range, indicating its preference for moderate environmental conditions. The genetic makeup of Nonlabens dokdonensis DSW-6 includes a single replicon, which is relevant for understanding its genetic stability and replication processes. This trait can be significant when considering the bacterium's adaptability in various environments, especially when faced with changes in nutrient availability or other stresses. The accession number for N. dokdonensis DSW-6 is NC_020156.1, which serves as a reference for genomic studies and further research into its genetic characteristics. Understanding the genomic features of this bacterium can provide insights into its metabolic capabilities and ecological roles. In summary, the combination of its Gram-negative cell wall structure, aerobic metabolism, mesophilic nature, and genetic characteristics suggests that Nonlabens dokdonensis DSW-6 may play a specific role in the decomposition processes within its ecosystem, contributing to nutrient cycling and the maintenance of microbial diversity in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens dokdonensis
StrainDSW-6

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens dokdonensis DSW-6, complete sequence.

Gene Summary

Adenine Count

1271809 bp

Thymine Count

1260359 bp

Guanine Count

691910 bp

Cytosine Count

690554 bp

Genome Length

3914632 bp

Protein-coding Genes

3440 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxymethylglutaryl-coa lyaseDDD_RS10335Not AvailablePositive2372744 - 237360732065.4
is110 family transposaseDDD_RS10340Not AvailablePositive2373752 - 237401510436.5
gh3 auxin-responsive promoter family proteinDDD_RS10345Not AvailablePositive2374222 - 237574256988.4
hypothetical proteinDDD_RS10350Not AvailableNegative2376028 - 237661823048.7
2fe-2s iron-sulfur cluster-binding proteinDDD_RS10355Not AvailablePositive2376812 - 237788840262.1
1,2-phenylacetyl-coa epoxidase subunit paaaDDD_RS10360Not AvailablePositive2378170 - 237912936695.4
1,2-phenylacetyl-coa epoxidase subunit paabDDD_RS10365Not AvailablePositive2379236 - 237952010849.7
four helix bundle proteinDDD_RS10370Not AvailablePositive2379645 - 237999213116.8
1,2-phenylacetyl-coa epoxidase subunit paacDDD_RS10375Not AvailablePositive2380063 - 238086630930.7
four helix bundle proteinDDD_RS10380Not AvailablePositive2380948 - 238129813147.9

Displaying genes 2101 – 2110 of 3491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.