Nonlabens dokdonensis DSW-6

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Nonlabens

Description

Nonlabens dokdonensis DSW-6 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species is non-motile and does not form spores, which may influence its ecological interactions and survival strategies in its natural habitat. The optimal growth temperature for N. dokdonensis DSW-6 is 25°C, placing it within the mesophilic temperature range, indicating its preference for moderate environmental conditions. The genetic makeup of Nonlabens dokdonensis DSW-6 includes a single replicon, which is relevant for understanding its genetic stability and replication processes. This trait can be significant when considering the bacterium's adaptability in various environments, especially when faced with changes in nutrient availability or other stresses. The accession number for N. dokdonensis DSW-6 is NC_020156.1, which serves as a reference for genomic studies and further research into its genetic characteristics. Understanding the genomic features of this bacterium can provide insights into its metabolic capabilities and ecological roles. In summary, the combination of its Gram-negative cell wall structure, aerobic metabolism, mesophilic nature, and genetic characteristics suggests that Nonlabens dokdonensis DSW-6 may play a specific role in the decomposition processes within its ecosystem, contributing to nutrient cycling and the maintenance of microbial diversity in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusNonlabens
SpeciesNonlabens dokdonensis
StrainDSW-6

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nonlabens dokdonensis DSW-6, complete sequence.

Gene Summary

Adenine Count

1271809 bp

Thymine Count

1260359 bp

Guanine Count

691910 bp

Cytosine Count

690554 bp

Genome Length

3914632 bp

Protein-coding Genes

3440 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trmh family rna methyltransferaseDDD_RS08755Not AvailablePositive1978767 - 197950427409.2
porin family proteinDDD_RS08760Not AvailableNegative1979491 - 198019226596.3
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieDDD_RS08765Not AvailableNegative1980194 - 198092827092.7
trk system potassium transporter trkaDDD_RS08770Not AvailablePositive1981091 - 198244049162.5
trkh family potassium uptake proteinDDD_RS08775Not AvailablePositive1982440 - 198393654403.4
hypothetical proteinDDD_RS08780Not AvailablePositive1984029 - 198430710919.0
hypothetical proteinDDD_RS08785Not AvailablePositive1984316 - 198468414182.0
hypothetical proteinDDD_RS08790Not AvailableNegative1985075 - 198546714827.5
pyridoxal phosphate-dependent aminotransferaseDDD_RS08795Not AvailableNegative1985593 - 198678043432.9
16s rrna (guanine(527)-n(7))-methyltransferase rsmgDDD_RS08800Not AvailablePositive1986877 - 198751824089.2

Displaying genes 1781 – 1790 of 3491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.