Halobacteroides halobius DSM 5150

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halobacteroidaceae

Genus

Halobacteroides

Description

Halobacteroides halobius DSM 5150 is a halophilic bacterium characterized by its single replicon, which is crucial for its genetic stability and cellular functions. The organism is cataloged under the accession number NC_019978.1, providing a reference for its genomic information. As a member of the Halobacteroides genus, H. halobius is adapted to high-salinity environments, which significantly influences its metabolic pathways and physiological traits. This adaptation allows it to thrive in extreme conditions that would be inhospitable to many other microorganisms. The unique characteristics of halophilic organisms like H. halobius can offer insights into biogeochemical cycles in saline ecosystems, as they play a vital role in nutrient cycling and organic matter decomposition. The presence of H. halobius in its natural habitat highlights the ecological importance of halophiles in maintaining the balance of microbial communities in hypersaline environments. By contributing to the diversity of microbial life, H. halobius may also be involved in interactions with other organisms, influencing both the structure and function of these ecosystems. Understanding the specific traits of H. halobius is essential for appreciating its role in saline habitats and its potential applications in biotechnology and bioremediation.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalobacteroidaceae
GenusHalobacteroides
SpeciesHalobacteroides halobius
StrainDSM 5150

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halobacteroides halobius DSM 5150, complete sequence.

Gene Summary

Adenine Count

895898 bp

Thymine Count

893519 bp

Guanine Count

431939 bp

Cytosine Count

427899 bp

Genome Length

2649255 bp

Protein-coding Genes

2529 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lpta/osta family proteinHALHA_RS11900Not AvailableNegative2440924 - 244154123432.3
lps export abc transporter periplasmic protein lptcHALHA_RS11905Not AvailableNegative2441531 - 244208821239.1
hypothetical proteinHALHA_RS11910Not AvailableNegative2442081 - 244256618652.8
lpta/osta family proteinHALHA_RS11915Not AvailableNegative2442708 - 244432163599.4
lptf/lptg family permeaseHALHA_RS11920Not AvailableNegative2444326 - 244540541176.8
lptf/lptg family permeaseHALHA_RS11925Not AvailableNegative2445420 - 244650541666.4
peptidase s8HALHA_RS13195Not AvailableNegative2446576 - 244820758599.6
l,d-transpeptidaseHALHA_RS13200Not AvailablePositive2448817 - 244965932181.4
yjbh domain-containing proteinHALHA_RS13205Not AvailableNegative2449694 - 245034423164.5
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseHALHA_RS11945Not AvailableNegative2450341 - 245138737181.6

Displaying genes 2421 – 2430 of 2623 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014067p-Aminobenzoic acidC7H7NO2Chemical structure of p-Aminobenzoic acid150-13-0
Average137.136Da
Monoisotopic137.047678473Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0014084GlycogenC24H42O21Chemical structure of Glycogen9005-79-2
Average666.5777Da
Monoisotopic666.221858406Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014086Amylose(C12H20O11)nC2H6Chemical structure of Amylose9005-82-7Not available

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.