Methanoregula formicica SMSP

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanomicrobiales

Family

Methanoregulaceae

Genus

Methanoregula

Description

Methanoregula formicica SMSP is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility and enhance its ecological adaptability. This organism possesses a single replicon, indicating a streamlined genomic architecture that could potentially influence its replication and metabolic processes. The genomic information for Methanoregula formicica SMSP is cataloged under the accession NC_019943.1, providing a reference point for further studies and comparative analyses within microbial ecology. This bacterium is known to play a significant role in anaerobic environments, particularly in methanogenic processes, where it contributes to the production of methane from various substrates. The presence of flagella suggests that Methanoregula formicica SMSP might be capable of navigating through complex microbial communities, which is essential for its survival and function in diverse ecosystems, such as wetlands and the digestive systems of ruminants. The ecological insight garnered from the study of Methanoregula formicica SMSP highlights its importance in biogeochemical cycles, specifically in carbon cycling and methane emissions. Understanding its metabolic pathways and interactions with other microbial species could provide valuable information regarding its contribution to greenhouse gas dynamics and the overall health of anaerobic ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanomicrobiales
FamilyMethanoregulaceae
GenusMethanoregula
SpeciesMethanoregula formicica
StrainSMSP

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanoregula formicica SMSP, complete sequence.

Gene Summary

Adenine Count

634194 bp

Thymine Count

629665 bp

Guanine Count

777632 bp

Cytosine Count

779367 bp

Genome Length

2820858 bp

Protein-coding Genes

2863 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinMETFOR_RS00355Not AvailablePositive62364 - 6277115020.9
duf5591 domain-containing proteinMETFOR_RS00360Not AvailablePositive62880 - 6353325264.4
flavodoxin family proteinMETFOR_RS00365Not AvailablePositive63601 - 6421522678.9
flavodoxin family proteinMETFOR_RS00370Not AvailablePositive64223 - 6482822124.5
zn-dependent proteaseMETFOR_RS00375Not AvailableNegative64836 - 6551624384.8
chorismate mutaseMETFOR_RS00380Not AvailablePositive65595 - 6587910577.9
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseMETFOR_RS00385Not AvailableNegative65931 - 6751455209.8
m23 family metallopeptidaseMETFOR_RS16110Not AvailablePositive67676 - 6886642548.9
c45 family autoproteolytic acyltransferase/hydolaseMETFOR_RS00395Not AvailablePositive68997 - 7020244613.0
2'-5' rna ligase family proteinMETFOR_RS00400Not AvailableNegative70241 - 7086424489.5

Displaying genes 71 – 80 of 2915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.