Synechococcus sp. PCC 6312

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. PCC 6312 is a freshwater cyanobacterium characterized as gram-negative and possessing flagella. This organism has two replicons, which is indicative of its genetic structure. The presence of flagella suggests that it is motile, allowing it to navigate its aquatic environment effectively. The habitat of Synechococcus sp. PCC 6312 is significant, as freshwater ecosystems are vital for biodiversity and serve as crucial resources for various organisms, including bacteria, plants, and animals. The adaptability of cyanobacteria like Synechococcus in these environments highlights their ecological importance, especially in nutrient cycling and primary production. The genetic information for Synechococcus sp. PCC 6312 is accessible through the following accession numbers: NC_019680.1 and NC_019681.1. These genetic resources can be instrumental for researchers studying the metabolic pathways and ecological roles of this cyanobacterium. In summary, Synechococcus sp. PCC 6312 exemplifies a motile, gram-negative cyanobacterium found in freshwater habitats, contributing to ecological processes such as nutrient cycling and primary production. Its genetic makeup, represented by its two replicons, provides insights into its adaptability and function within its ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. PCC 6312
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. PCC 6312
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. PCC 6312 plasmid pSYN6312.01, complete sequence.

Gene Summary

Adenine Count

6280 bp

Thymine Count

6127 bp

Guanine Count

5558 bp

Cytosine Count

5258 bp

Genome Length

23223 bp

Protein-coding Genes

34 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
photosystem ii high light acclimation radical sam proteinSYN6312_RS14960Not AvailablePositive3085600 - 308719560521.1
type i glyceraldehyde-3-phosphate dehydrogenaseSYN6312_RS14965Not AvailablePositive3087328 - 308834437122.3
pyridoxal-phosphate-dependent aminotransferase family proteinSYN6312_RS14970Not AvailablePositive3088403 - 308955140628.1
duf1838 domain-containing proteinSYN6312_RS14975Not AvailablePositive3089578 - 309042632299.4
rpn family recombination-promoting nuclease/putative transposaseSYN6312_RS14980Not AvailablePositive3090448 - 309128432239.7
is1 family transposaseSYN6312_RS14985Not AvailablePositive3091299 - 309173116140.3
sigma 54-interacting transcriptional regulatorSYN6312_RS14990Not AvailablePositive3091912 - 309444094354.7
hypothetical proteinSYN6312_RS14995Not AvailableNegative3094563 - 309528825948.1
eal domain-containing proteinSYN6312_RS15000Not AvailableNegative3095466 - 309624529168.1
homocysteine biosynthesis proteinSYN6312_RS15005Not AvailableNegative3096424 - 309759042139.0

Displaying genes 3121 – 3130 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.