Synechococcus sp. PCC 6312

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. PCC 6312 is a freshwater cyanobacterium characterized as gram-negative and possessing flagella. This organism has two replicons, which is indicative of its genetic structure. The presence of flagella suggests that it is motile, allowing it to navigate its aquatic environment effectively. The habitat of Synechococcus sp. PCC 6312 is significant, as freshwater ecosystems are vital for biodiversity and serve as crucial resources for various organisms, including bacteria, plants, and animals. The adaptability of cyanobacteria like Synechococcus in these environments highlights their ecological importance, especially in nutrient cycling and primary production. The genetic information for Synechococcus sp. PCC 6312 is accessible through the following accession numbers: NC_019680.1 and NC_019681.1. These genetic resources can be instrumental for researchers studying the metabolic pathways and ecological roles of this cyanobacterium. In summary, Synechococcus sp. PCC 6312 exemplifies a motile, gram-negative cyanobacterium found in freshwater habitats, contributing to ecological processes such as nutrient cycling and primary production. Its genetic makeup, represented by its two replicons, provides insights into its adaptability and function within its ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. PCC 6312
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. PCC 6312
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. PCC 6312 plasmid pSYN6312.01, complete sequence.

Gene Summary

Adenine Count

6280 bp

Thymine Count

6127 bp

Guanine Count

5558 bp

Cytosine Count

5258 bp

Genome Length

23223 bp

Protein-coding Genes

34 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hnh endonucleaseSYN6312_RS10560Not AvailablePositive2156707 - 215738425875.2
duf433 domain-containing proteinSYN6312_RS10565Not AvailablePositive2157638 - 21578628406.14
duf5615 family pin-like proteinSYN6312_RS10570Not AvailablePositive2157859 - 215821513396.1
abc transporter atp-binding proteinSYN6312_RS10575Not AvailableNegative2158212 - 215999966350.6
dna-methyltransferaseSYN6312_RS10580Not AvailablePositive2160375 - 216128034253.0
tigr04168 family proteinSYN6312_RS10585Not AvailableNegative2161257 - 216223736563.5
is1 family transposaseSYN6312_RS21005Not AvailablePositive2162800 - 21628863167.71
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuSYN6312_RS10590Not AvailablePositive2163301 - 216466249044.6
pentapeptide repeat-containing proteinSYN6312_RS10595Not AvailablePositive2164666 - 216517818158.6
pentapeptide repeat-containing proteinSYN6312_RS10600Not AvailablePositive2165187 - 216567218551.1

Displaying genes 2201 – 2210 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.