Synechococcus sp. PCC 6312

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. PCC 6312 is a freshwater cyanobacterium characterized as gram-negative and possessing flagella. This organism has two replicons, which is indicative of its genetic structure. The presence of flagella suggests that it is motile, allowing it to navigate its aquatic environment effectively. The habitat of Synechococcus sp. PCC 6312 is significant, as freshwater ecosystems are vital for biodiversity and serve as crucial resources for various organisms, including bacteria, plants, and animals. The adaptability of cyanobacteria like Synechococcus in these environments highlights their ecological importance, especially in nutrient cycling and primary production. The genetic information for Synechococcus sp. PCC 6312 is accessible through the following accession numbers: NC_019680.1 and NC_019681.1. These genetic resources can be instrumental for researchers studying the metabolic pathways and ecological roles of this cyanobacterium. In summary, Synechococcus sp. PCC 6312 exemplifies a motile, gram-negative cyanobacterium found in freshwater habitats, contributing to ecological processes such as nutrient cycling and primary production. Its genetic makeup, represented by its two replicons, provides insights into its adaptability and function within its ecosystem.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. PCC 6312
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. PCC 6312
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. PCC 6312 plasmid pSYN6312.01, complete sequence.

Gene Summary

Adenine Count

6280 bp

Thymine Count

6127 bp

Guanine Count

5558 bp

Cytosine Count

5258 bp

Genome Length

23223 bp

Protein-coding Genes

34 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSYN6312_RS00390Not AvailablePositive97052 - 9735410420.0
urease accessory protein uregSYN6312_RS00395Not AvailablePositive97428 - 9805422124.0
coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domainSYN6312_RS00400Not AvailableNegative98056 - 9925244759.9
cytochrome b/b6 domain-containing proteinSYN6312_RS00405Not AvailableNegative99429 - 10008224463.7
mbl fold metallo-hydrolaseSYN6312_RS00410Not AvailableNegative100312 - 10106426825.7
hypothetical proteinSYN6312_RS00415Not AvailablePositive101265 - 10282758953.7
urea abc transporter substrate-binding proteinSYN6312_RS00420Not AvailablePositive103093 - 10439146891.8
urea abc transporter permease subunit urtbSYN6312_RS00425Not AvailablePositive104565 - 10571641034.5
urea abc transporter permease subunit urtcSYN6312_RS00430Not AvailablePositive105726 - 10693744507.2
urea abc transporter atp-binding protein urtdSYN6312_RS00435Not AvailablePositive106897 - 10764927811.8

Displaying genes 161 – 170 of 3727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.