Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | O104:H4 2011C-3493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli O104:H4 str. 2011C-3493, complete sequence.
Gene Summary
Adenine Count
1298006 bp
Thymine Count
1300875 bp
Guanine Count
1338990 bp
Cytosine Count
1335226 bp
Genome Length
5273097 bp
Protein-coding Genes
4655 genes
Non-Coding Genes
556 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | O3K_RS04345 | Not Available | Positive | 888265 - 889743 | 55206.3 |
| type vi secretion system protein aaic/hcp2 | O3K_RS04350 | Not Available | Positive | 889753 - 890259 | 18801.5 |
| hypothetical protein | O3K_RS04355 | Not Available | Positive | 890269 - 890691 | 16160.9 |
| type vi secretion system baseplate subunit tssf | O3K_RS04360 | Not Available | Positive | 890684 - 892486 | 68629.8 |
| type vi secretion system baseplate subunit tssg | O3K_RS04365 | Not Available | Positive | 892477 - 893409 | 35403.2 |
| type vi secretion system vgr family protein | O3K_RS04370 | Not Available | Positive | 893422 - 895404 | 73709.2 |
| duf6931 family protein | O3K_RS04375 | Not Available | Positive | 895415 - 895882 | 17833.1 |
| paar domain-containing protein | O3K_RS04380 | Not Available | Positive | 895892 - 896191 | 9787.4 |
| type vi secretion system protein tssa | O3K_RS04385 | Not Available | Positive | 896195 - 897271 | 41895.4 |
| type vi secretion lipoprotein tssj | O3K_RS04390 | Not Available | Positive | 897279 - 897830 | 20276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.





