Desulfobacula toluolica Tol2

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfobacula

Description

Desulfobacula toluolica Tol2 is an anaerobic bacterium notable for its ability to thrive in environments devoid of oxygen. This organism is characterized by a single replicon, which indicates a streamlined genomic structure. The complete genome of Desulfobacula toluolica Tol2 is cataloged under the accession number NC_018645.1, providing a valuable resource for researchers interested in its genetic makeup and metabolic pathways. Desulfobacula toluolica Tol2 is part of the Desulfobacula genus, which is known for its role in sulfate reduction, a critical process in the biogeochemical cycling of sulfur. This metabolic capability allows it to utilize sulfate as a terminal electron acceptor, facilitating energy production in anaerobic conditions. The ecological significance of Desulfobacula toluolica Tol2 lies in its potential contributions to the degradation of aromatic hydrocarbons, such as toluene, in contaminated environments. By participating in the breakdown of pollutants, this bacterium may play a role in bioremediation efforts, helping to restore the balance of ecosystems impacted by industrial activities. Its anaerobic nature and specific metabolic pathways make it a candidate for further studies in environmental microbiology, especially regarding its applications in cleaning up hydrocarbon-contaminated sites. Understanding the traits and capabilities of Desulfobacula toluolica Tol2 can enhance our knowledge of microbial ecology and the biogeochemical processes that underpin ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfobacula
SpeciesDesulfobacula toluolica
StrainTol2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacula toluolica Tol2, complete sequence.

Gene Summary

Adenine Count

1516808 bp

Thymine Count

1526625 bp

Guanine Count

1082793 bp

Cytosine Count

1071679 bp

Genome Length

5197905 bp

Protein-coding Genes

4516 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i polyketide synthaseTOL2_RS18360Not AvailableNegative4031459 - 4039111281320.0
pfad family polyunsaturated fatty acid/polyketide biosynthesis proteinTOL2_RS18365Not AvailableNegative4039227 - 404081358959.4
site-specific tyrosine recombinase xerdTOL2_RS18370Not AvailableNegative4040950 - 404183733599.4
sumf1/egtb/pvdo family nonheme iron enzymeTOL2_RS18375Not AvailableNegative4041859 - 404361967150.6
para family proteinTOL2_RS18380Not AvailablePositive4043808 - 404458728967.2
hypothetical proteinTOL2_RS18385Not AvailablePositive4044584 - 404499115600.3
dna topoisomerase iTOL2_RS18390Not AvailablePositive4044991 - 404646655842.3
aminofutalosine synthase mqneTOL2_RS18395Not AvailablePositive4046466 - 404757841679.8
cyclic dehypoxanthinyl futalosine synthaseTOL2_RS18400Not AvailablePositive4047584 - 404864240115.2
amidohydrolase family proteinTOL2_RS18405Not AvailablePositive4048639 - 404981743430.4

Displaying genes 3631 – 3640 of 4606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014043Phenylacetic acidC8H8O2Chemical structure of Phenylacetic acid103-82-2
Average136.1479Da
Monoisotopic136.0524295Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.