Desulfobacula toluolica Tol2

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfobacula

Description

Desulfobacula toluolica Tol2 is an anaerobic bacterium notable for its ability to thrive in environments devoid of oxygen. This organism is characterized by a single replicon, which indicates a streamlined genomic structure. The complete genome of Desulfobacula toluolica Tol2 is cataloged under the accession number NC_018645.1, providing a valuable resource for researchers interested in its genetic makeup and metabolic pathways. Desulfobacula toluolica Tol2 is part of the Desulfobacula genus, which is known for its role in sulfate reduction, a critical process in the biogeochemical cycling of sulfur. This metabolic capability allows it to utilize sulfate as a terminal electron acceptor, facilitating energy production in anaerobic conditions. The ecological significance of Desulfobacula toluolica Tol2 lies in its potential contributions to the degradation of aromatic hydrocarbons, such as toluene, in contaminated environments. By participating in the breakdown of pollutants, this bacterium may play a role in bioremediation efforts, helping to restore the balance of ecosystems impacted by industrial activities. Its anaerobic nature and specific metabolic pathways make it a candidate for further studies in environmental microbiology, especially regarding its applications in cleaning up hydrocarbon-contaminated sites. Understanding the traits and capabilities of Desulfobacula toluolica Tol2 can enhance our knowledge of microbial ecology and the biogeochemical processes that underpin ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfobacula
SpeciesDesulfobacula toluolica
StrainTol2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacula toluolica Tol2, complete sequence.

Gene Summary

Adenine Count

1516808 bp

Thymine Count

1526625 bp

Guanine Count

1082793 bp

Cytosine Count

1071679 bp

Genome Length

5197905 bp

Protein-coding Genes

4516 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catalaseTOL2_RS01300Not AvailablePositive276917 - 27837455446.2
4fe-4s binding proteinTOL2_RS01305Not AvailablePositive278968 - 27925510717.8
pyruvate synthase subunit poraTOL2_RS01310Not AvailablePositive279252 - 28047844531.8
thiamine pyrophosphate-dependent enzymeTOL2_RS01315Not AvailablePositive280480 - 28143934865.1
2-oxoacid:acceptor oxidoreductase family proteinTOL2_RS01320Not AvailablePositive281455 - 28200319793.9
4fe-4s dicluster domain-containing proteinTOL2_RS01325Not AvailablePositive282066 - 28272224308.4
molybdopterin-dependent oxidoreductaseTOL2_RS01330Not AvailablePositive282738 - 28534497774.3
hypothetical proteinTOL2_RS01335Not AvailablePositive285359 - 28626133457.1
duf2080 family transposase-associated proteinTOL2_RS01340Not AvailablePositive286650 - 2868356999.34
gnat family n-acetyltransferaseTOL2_RS01345Not AvailablePositive286850 - 28729016344.8

Displaying genes 301 – 310 of 4606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014043Phenylacetic acidC8H8O2Chemical structure of Phenylacetic acid103-82-2
Average136.1479Da
Monoisotopic136.0524295Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.