Desulfobacula toluolica Tol2

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfobacula

Description

Desulfobacula toluolica Tol2 is an anaerobic bacterium notable for its ability to thrive in environments devoid of oxygen. This organism is characterized by a single replicon, which indicates a streamlined genomic structure. The complete genome of Desulfobacula toluolica Tol2 is cataloged under the accession number NC_018645.1, providing a valuable resource for researchers interested in its genetic makeup and metabolic pathways. Desulfobacula toluolica Tol2 is part of the Desulfobacula genus, which is known for its role in sulfate reduction, a critical process in the biogeochemical cycling of sulfur. This metabolic capability allows it to utilize sulfate as a terminal electron acceptor, facilitating energy production in anaerobic conditions. The ecological significance of Desulfobacula toluolica Tol2 lies in its potential contributions to the degradation of aromatic hydrocarbons, such as toluene, in contaminated environments. By participating in the breakdown of pollutants, this bacterium may play a role in bioremediation efforts, helping to restore the balance of ecosystems impacted by industrial activities. Its anaerobic nature and specific metabolic pathways make it a candidate for further studies in environmental microbiology, especially regarding its applications in cleaning up hydrocarbon-contaminated sites. Understanding the traits and capabilities of Desulfobacula toluolica Tol2 can enhance our knowledge of microbial ecology and the biogeochemical processes that underpin ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfobacula
SpeciesDesulfobacula toluolica
StrainTol2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacula toluolica Tol2, complete sequence.

Gene Summary

Adenine Count

1516808 bp

Thymine Count

1526625 bp

Guanine Count

1082793 bp

Cytosine Count

1071679 bp

Genome Length

5197905 bp

Protein-coding Genes

4516 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is66 family insertion sequence element accessory protein tnpbTOL2_RS11200Not AvailablePositive2429358 - 242970513613.7
is66 family transposaseTOL2_RS11205Not AvailablePositive2429750 - 243128258099.4
hypothetical proteinTOL2_RS24890Not AvailablePositive2431843 - 24320076057.42
type ii toxin-antitoxin system pemk/mazf family toxinTOL2_RS11215Not AvailableNegative2432086 - 243242112998.1
abrb/maze/spovt family dna-binding domain-containing proteinTOL2_RS11220Not AvailableNegative2432402 - 243267410604.5
group ii intron reverse transcriptase/maturaseTOL2_RS11225Not AvailableNegative2432902 - 243424251968.3
hypothetical proteinTOL2_RS24140Not AvailablePositive2434645 - 24348999270.51
transposaseTOL2_RS11235Not AvailableNegative2435315 - 243640041655.1
tyrosine-type recombinase/integraseTOL2_RS11240Not AvailableNegative2436397 - 243727233720.1
transposaseTOL2_RS11250Not AvailablePositive2438045 - 243859320863.6

Displaying genes 2271 – 2280 of 4606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014043Phenylacetic acidC8H8O2Chemical structure of Phenylacetic acid103-82-2
Average136.1479Da
Monoisotopic136.0524295Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.