Alpha proteobacterium HIMB59

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Alpha proteobacterium HIMB59 is characterized by having a single replicon, which is significant for its genomic structure and replication dynamics. The genomic information of this bacterium is cataloged under the accession number NC_018644.1, providing a reference point for researchers interested in its genetic makeup and potential applications. As an Alpha proteobacterium, HIMB59 is part of a diverse group of bacteria known for their ecological roles, particularly in aquatic environments. This group includes many important microorganisms that contribute to nutrient cycling and have symbiotic relationships with plants and other organisms. Although specific ecological interactions of HIMB59 are not detailed, members of the Alpha proteobacteria are commonly involved in processes such as nitrogen fixation and degradation of organic materials. Understanding the genomic traits of HIMB59, particularly its single replicon, may offer insights into its metabolic capabilities and evolutionary adaptations. The streamlined genomic structure could suggest a specialization in niche environments, allowing it to thrive in specific ecological contexts. The study of such microorganisms can enhance our understanding of biodiversity and ecosystem functioning, particularly in marine ecosystems where Alpha proteobacteria are abundant and play critical roles in biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium HIMB59, complete sequence.

Gene Summary

Adenine Count

479567 bp

Thymine Count

475606 bp

Guanine Count

226594 bp

Cytosine Count

228360 bp

Genome Length

1410127 bp

Protein-coding Genes

1482 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent helicaseHIMB59_RS04725Not AvailablePositive877387 - 87940577921.9
m24 family metallopeptidaseHIMB59_RS04730Not AvailablePositive879402 - 88112667554.0
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaHIMB59_RS04735Not AvailableNegative881109 - 88309475744.9
dna repair protein recnHIMB59_RS04740Not AvailableNegative883102 - 88475163090.4
outer membrane protein assembly factor bamdHIMB59_RS04745Not AvailableNegative884757 - 88562333888.3
n-acetylmuramoyl-l-alanine amidaseHIMB59_RS04750Not AvailablePositive885628 - 88626625373.8
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive886283 - 886623Not Available
division/cell wall cluster transcriptional repressor mrazHIMB59_RS04755Not AvailablePositive886667 - 88708316309.8
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhHIMB59_RS04760Not AvailablePositive887080 - 88798535029.9
hypothetical proteinHIMB59_RS04765Not AvailablePositive887982 - 88827811960.6

Displaying genes 951 – 960 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.