Alpha proteobacterium HIMB59

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Alpha proteobacterium HIMB59 is characterized by having a single replicon, which is significant for its genomic structure and replication dynamics. The genomic information of this bacterium is cataloged under the accession number NC_018644.1, providing a reference point for researchers interested in its genetic makeup and potential applications. As an Alpha proteobacterium, HIMB59 is part of a diverse group of bacteria known for their ecological roles, particularly in aquatic environments. This group includes many important microorganisms that contribute to nutrient cycling and have symbiotic relationships with plants and other organisms. Although specific ecological interactions of HIMB59 are not detailed, members of the Alpha proteobacteria are commonly involved in processes such as nitrogen fixation and degradation of organic materials. Understanding the genomic traits of HIMB59, particularly its single replicon, may offer insights into its metabolic capabilities and evolutionary adaptations. The streamlined genomic structure could suggest a specialization in niche environments, allowing it to thrive in specific ecological contexts. The study of such microorganisms can enhance our understanding of biodiversity and ecosystem functioning, particularly in marine ecosystems where Alpha proteobacteria are abundant and play critical roles in biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium HIMB59, complete sequence.

Gene Summary

Adenine Count

479567 bp

Thymine Count

475606 bp

Guanine Count

226594 bp

Cytosine Count

228360 bp

Genome Length

1410127 bp

Protein-coding Genes

1482 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 4 proteinHIMB59_RS03025Not AvailablePositive565905 - 56699942103.6
glycosyltransferase family 9 proteinHIMB59_RS03030Not AvailablePositive566999 - 56791635096.4
translation initiation factor if-3HIMB59_RS03035Not AvailablePositive568026 - 56857121036.7
50s ribosomal protein l35HIMB59_RS03040Not AvailablePositive568665 - 5688657246.09
50s ribosomal protein l20HIMB59_RS03045Not AvailablePositive568885 - 56924413955.1
phenylalanine--trna ligase subunit alphaHIMB59_RS03050Not AvailablePositive569253 - 57030239539.2
phenylalanine--trna ligase subunit betaHIMB59_RS03055Not AvailablePositive570302 - 57269590149.6
translation elongation factor 4HIMB59_RS03060Not AvailablePositive572695 - 57449467289.8
glycosyltransferaseHIMB59_RS03065Not AvailablePositive574500 - 57532132473.0
glycosyltransferase family 9 proteinHIMB59_RS03070Not AvailableNegative575316 - 57623936003.1

Displaying genes 611 – 620 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.