Alpha proteobacterium HIMB59

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Alpha proteobacterium HIMB59 is characterized by having a single replicon, which is significant for its genomic structure and replication dynamics. The genomic information of this bacterium is cataloged under the accession number NC_018644.1, providing a reference point for researchers interested in its genetic makeup and potential applications. As an Alpha proteobacterium, HIMB59 is part of a diverse group of bacteria known for their ecological roles, particularly in aquatic environments. This group includes many important microorganisms that contribute to nutrient cycling and have symbiotic relationships with plants and other organisms. Although specific ecological interactions of HIMB59 are not detailed, members of the Alpha proteobacteria are commonly involved in processes such as nitrogen fixation and degradation of organic materials. Understanding the genomic traits of HIMB59, particularly its single replicon, may offer insights into its metabolic capabilities and evolutionary adaptations. The streamlined genomic structure could suggest a specialization in niche environments, allowing it to thrive in specific ecological contexts. The study of such microorganisms can enhance our understanding of biodiversity and ecosystem functioning, particularly in marine ecosystems where Alpha proteobacteria are abundant and play critical roles in biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium HIMB59, complete sequence.

Gene Summary

Adenine Count

479567 bp

Thymine Count

475606 bp

Guanine Count

226594 bp

Cytosine Count

228360 bp

Genome Length

1410127 bp

Protein-coding Genes

1482 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i dna topoisomeraseHIMB59_RS07065Not AvailablePositive1308185 - 131069895250.7
aspartate--trna ligaseHIMB59_RS07070Not AvailableNegative1310695 - 131246467298.1
dnaa/hda family proteinHIMB59_RS07075Not AvailableNegative1312436 - 131307424665.6
hypothetical proteinHIMB59_RS07080Not AvailableNegative1313074 - 131370624987.1
phosphoribosylformylglycinamidine cyclo-ligaseHIMB59_RS07085Not AvailablePositive1313706 - 131465635530.9
formyltransferase family proteinHIMB59_RS07765Not AvailablePositive1314643 - 131518220712.7
nucleoside-diphosphate kinaseHIMB59_RS07095Not AvailableNegative1315174 - 131558715277.2
m17 family metallopeptidaseHIMB59_RS07100Not AvailableNegative1315602 - 131698151414.1
lptf/lptg family permeaseHIMB59_RS07105Not AvailablePositive1316980 - 131801140781.5
hypothetical proteinHIMB59_RS07110Not AvailablePositive1318008 - 131896437825.0

Displaying genes 1421 – 1430 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.