Alpha proteobacterium HIMB59

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Alpha proteobacterium HIMB59 is characterized by having a single replicon, which is significant for its genomic structure and replication dynamics. The genomic information of this bacterium is cataloged under the accession number NC_018644.1, providing a reference point for researchers interested in its genetic makeup and potential applications. As an Alpha proteobacterium, HIMB59 is part of a diverse group of bacteria known for their ecological roles, particularly in aquatic environments. This group includes many important microorganisms that contribute to nutrient cycling and have symbiotic relationships with plants and other organisms. Although specific ecological interactions of HIMB59 are not detailed, members of the Alpha proteobacteria are commonly involved in processes such as nitrogen fixation and degradation of organic materials. Understanding the genomic traits of HIMB59, particularly its single replicon, may offer insights into its metabolic capabilities and evolutionary adaptations. The streamlined genomic structure could suggest a specialization in niche environments, allowing it to thrive in specific ecological contexts. The study of such microorganisms can enhance our understanding of biodiversity and ecosystem functioning, particularly in marine ecosystems where Alpha proteobacteria are abundant and play critical roles in biogeochemical cycles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium HIMB59, complete sequence.

Gene Summary

Adenine Count

479567 bp

Thymine Count

475606 bp

Guanine Count

226594 bp

Cytosine Count

228360 bp

Genome Length

1410127 bp

Protein-coding Genes

1482 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHIMB59_RS05705Not AvailableNegative1051975 - 10522359437.14
lytic transglycosylase domain-containing proteinHIMB59_RS05710Not AvailablePositive1052470 - 105352541321.1
hypothetical proteinHIMB59_RS05715Not AvailablePositive1053509 - 105428229548.0
d-alanyl-d-alanine carboxypeptidase family proteinHIMB59_RS05720Not AvailablePositive1054251 - 105539342187.6
dtmp kinaseHIMB59_RS07715Not AvailablePositive1055402 - 105600123751.4
hypothetical proteinHIMB59_RS07720Not AvailablePositive1055983 - 105677730925.4
methionine--trna ligaseHIMB59_RS05735Not AvailablePositive1056767 - 105828458734.7
tatd family hydrolaseHIMB59_RS05740Not AvailablePositive1058290 - 105906629861.6
mbl fold metallo-hydrolaseHIMB59_RS05745Not AvailablePositive1059054 - 105983930120.9
ybak/ebsc family proteinHIMB59_RS05750Not AvailablePositive1059893 - 106035416746.6

Displaying genes 1151 – 1160 of 1523 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.