Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/glutamate racemase family protein | HIMB5_RS04505 | Not Available | Positive | 838140 - 838886 | 27992.9 |
| hypothetical protein | HIMB5_RS04510 | Not Available | Positive | 838890 - 839330 | 17520.3 |
| dmt family transporter | HIMB5_RS04515 | Not Available | Positive | 839333 - 840181 | 30879.8 |
| sarcosine oxidase subunit gamma | HIMB5_RS04520 | Not Available | Negative | 840183 - 840767 | 21768.8 |
| sarcosine oxidase subunit alpha family protein | HIMB5_RS04525 | Not Available | Negative | 840764 - 843760 | 111553.0 |
| sarcosine oxidase subunit delta | HIMB5_RS04530 | Not Available | Negative | 843757 - 844026 | 10544.7 |
| sarcosine oxidase subunit beta family protein | HIMB5_RS04535 | Not Available | Negative | 844027 - 845283 | 46099.3 |
| formate--tetrahydrofolate ligase | HIMB5_RS04540 | Not Available | Positive | 845390 - 847069 | 61066.1 |
| glutamine amidotransferase-related protein | HIMB5_RS04545 | Not Available | Negative | 847073 - 847855 | 29886.9 |
| nad(p)-binding domain-containing protein | HIMB5_RS04550 | Not Available | Positive | 847956 - 849287 | 51713.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
