Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | HIMB5_RS04260 | Not Available | Negative | 795691 - 798120 | 91401.7 |
| cytochrome c | HIMB5_RS04265 | Not Available | Negative | 798287 - 798748 | 17541.2 |
| cytochrome b | HIMB5_RS04270 | Not Available | Positive | 798749 - 799276 | 20095.4 |
| class i sam-dependent methyltransferase | HIMB5_RS04275 | Not Available | Negative | 799269 - 799985 | 28250.6 |
| 30s ribosomal protein s16 | HIMB5_RS04280 | Not Available | Positive | 800037 - 800989 | 34433.1 |
| mate family efflux transporter | HIMB5_RS04285 | Not Available | Positive | 800989 - 802299 | 49348.8 |
| duf4396 domain-containing protein | HIMB5_RS04290 | Not Available | Negative | 802296 - 802730 | 16113.4 |
| mbl fold metallo-hydrolase | HIMB5_RS04295 | Not Available | Positive | 802782 - 803462 | 25367.1 |
| lyse family translocator | HIMB5_RS04300 | Not Available | Positive | 803475 - 804077 | 22734.6 |
| thioredoxin family protein | HIMB5_RS04305 | Not Available | Negative | 804072 - 804440 | 14249.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
