Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | HIMB5_RS03510 | Not Available | Negative | 646652 - 647122 | 17980.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | HIMB5_RS03515 | Not Available | Negative | 647122 - 648006 | 32034.5 |
| lytic transglycosylase domain-containing protein | HIMB5_RS03520 | Not Available | Positive | 648049 - 650313 | 88965.9 |
| Trna-ser | Not Available | Not Available | Positive | 650314 - 650405 | Not Available |
| sarcosine oxidase subunit beta family protein | HIMB5_RS03530 | Not Available | Positive | 650474 - 651727 | 45594.4 |
| sarcosine oxidase subunit delta | HIMB5_RS03535 | Not Available | Positive | 651727 - 652002 | 10763.8 |
| sarcosine oxidase subunit alpha family protein | HIMB5_RS03540 | Not Available | Positive | 652012 - 655017 | 112789.0 |
| sarcosine oxidase subunit gamma | HIMB5_RS03545 | Not Available | Positive | 655010 - 655573 | 21515.5 |
| abc transporter substrate-binding protein | HIMB5_RS03550 | Not Available | Positive | 655629 - 656396 | 28444.2 |
| amino acid abc transporter permease | HIMB5_RS03555 | Not Available | Positive | 656437 - 657168 | 27203.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
