Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphatase | HIMB5_RS03265 | Not Available | Positive | 608591 - 609535 | 34006.6 |
| single-stranded-dna-specific exonuclease recj | HIMB5_RS03270 | Not Available | Positive | 609532 - 611214 | 64253.6 |
| Trna-glu | Not Available | Not Available | Positive | 611260 - 611334 | Not Available |
| giy-yig nuclease family protein | HIMB5_RS03280 | Not Available | Positive | 611339 - 611608 | 10830.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HIMB5_RS03285 | Not Available | Positive | 611595 - 612125 | 20381.0 |
| glycosyltransferase | HIMB5_RS03290 | Not Available | Positive | 612132 - 614246 | 82334.7 |
| glycosyltransferase family 2 protein | HIMB5_RS03295 | Not Available | Positive | 614250 - 615119 | 34223.3 |
| class i sam-dependent methyltransferase | HIMB5_RS03300 | Not Available | Positive | 615123 - 615803 | 27048.4 |
| glycosyltransferase | HIMB5_RS03305 | Not Available | Negative | 615804 - 616637 | 32668.9 |
| site-specific integrase | HIMB5_RS03310 | Not Available | Negative | 616643 - 617599 | 36116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
