Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secd | HIMB5_RS03115 | Not Available | Positive | 581175 - 582731 | 57614.4 |
| protein translocase subunit secf | HIMB5_RS03120 | Not Available | Positive | 582728 - 583612 | 33199.6 |
| urate hydroxylase puud | HIMB5_RS03125 | Not Available | Negative | 583614 - 584216 | 22155.7 |
| excinuclease abc subunit uvra | HIMB5_RS03130 | Not Available | Negative | 584262 - 587117 | 106523.0 |
| single-stranded dna-binding protein | HIMB5_RS03135 | Not Available | Positive | 587208 - 587666 | 16721.7 |
| dna gyrase subunit a | HIMB5_RS03140 | Not Available | Positive | 587674 - 590253 | 95697.0 |
| pantetheine-phosphate adenylyltransferase | HIMB5_RS03145 | Not Available | Positive | 590253 - 590744 | 18577.9 |
| peptidylprolyl isomerase | HIMB5_RS03150 | Not Available | Positive | 590741 - 591301 | 20842.9 |
| trna guanosine(34) transglycosylase tgt | HIMB5_RS03155 | Not Available | Positive | 591314 - 592426 | 41815.5 |
| Trna-lys | Not Available | Not Available | Positive | 592509 - 592584 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
