Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | HIMB5_RS02505 | Not Available | Positive | 468870 - 470174 | 48971.0 |
| fumarylacetoacetate hydrolase | HIMB5_RS02510 | Not Available | Negative | 470171 - 470944 | 29167.5 |
| m23 family metallopeptidase | HIMB5_RS02515 | Not Available | Negative | 470955 - 471743 | 29349.8 |
| sdr family nad(p)-dependent oxidoreductase | HIMB5_RS02520 | Not Available | Negative | 471744 - 472508 | 27449.9 |
| sdr family nad(p)-dependent oxidoreductase | HIMB5_RS02525 | Not Available | Negative | 472508 - 473272 | 27880.6 |
| terc family protein | HIMB5_RS02530 | Not Available | Negative | 473265 - 473861 | 21745.4 |
| gmc family oxidoreductase | HIMB5_RS02535 | Not Available | Negative | 473861 - 475456 | 58973.7 |
| trap transporter substrate-binding protein | HIMB5_RS02540 | Not Available | Positive | 475606 - 476703 | 39604.0 |
| trap transporter small permease subunit | HIMB5_RS02545 | Not Available | Positive | 476773 - 477387 | 23503.2 |
| trap transporter large permease subunit | HIMB5_RS02550 | Not Available | Positive | 477388 - 478722 | 48150.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
