Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytoq family protein | HIMB5_RS02290 | Not Available | Positive | 433079 - 433528 | 16676.7 |
| hypothetical protein | HIMB5_RS02295 | Not Available | Positive | 433528 - 434142 | 23548.4 |
| hypothetical protein | HIMB5_RS02305 | Not Available | Negative | 434539 - 434856 | 12355.2 |
| hypothetical protein | HIMB5_RS02310 | Not Available | Negative | 434861 - 435262 | 16133.1 |
| cupin domain-containing protein | HIMB5_RS02315 | Not Available | Positive | 435327 - 435707 | 14149.5 |
| yajq family cyclic di-gmp-binding protein | HIMB5_RS02320 | Not Available | Negative | 435708 - 436193 | 18229.2 |
| rip metalloprotease rsep | HIMB5_RS02325 | Not Available | Positive | 436316 - 437428 | 41662.4 |
| hu family dna-binding protein | HIMB5_RS02330 | Not Available | Positive | 437587 - 437862 | 10036.2 |
| ammonium transporter | HIMB5_RS02335 | Not Available | Positive | 438001 - 439302 | 45264.1 |
| thioredoxin-dependent thiol peroxidase | HIMB5_RS02340 | Not Available | Negative | 439423 - 439887 | 18069.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
