Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | HIMB5_RS01595 | Not Available | Positive | 312235 - 313677 | 54070.5 |
| fe-s cluster assembly atpase sufc | HIMB5_RS01600 | Not Available | Positive | 313678 - 314412 | 27353.1 |
| fe-s cluster assembly protein sufd | HIMB5_RS01605 | Not Available | Positive | 314412 - 315653 | 47631.0 |
| aminotransferase class v-fold plp-dependent enzyme | HIMB5_RS01610 | Not Available | Positive | 315643 - 316860 | 45255.4 |
| fe-s cluster assembly sulfur transfer protein sufu | HIMB5_RS01615 | Not Available | Positive | 316860 - 317324 | 17476.0 |
| iron-sulfur cluster assembly protein | HIMB5_RS01620 | Not Available | Positive | 317328 - 317624 | 11345.8 |
| hesb/isca family protein | HIMB5_RS01625 | Not Available | Positive | 317624 - 317956 | 12117.4 |
| type i glutamate--ammonia ligase | HIMB5_RS01630 | Not Available | Negative | 318209 - 319615 | 52171.9 |
| ybak/ebsc family protein | HIMB5_RS01635 | Not Available | Positive | 319718 - 320200 | 17656.5 |
| dmt family transporter | HIMB5_RS01640 | Not Available | Positive | 320197 - 321078 | 32742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
