Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | HIMB5_RS01245 | Not Available | Positive | 240682 - 241785 | 41223.8 |
| glycine cleavage system protein gcvh | HIMB5_RS01250 | Not Available | Positive | 241785 - 242162 | 13701.9 |
| aminomethyl-transferring glycine dehydrogenase | HIMB5_RS01255 | Not Available | Positive | 242165 - 245035 | 106517.0 |
| nad(p)/fad-dependent oxidoreductase | HIMB5_RS01260 | Not Available | Positive | 245042 - 246280 | 48155.4 |
| duf1365 domain-containing protein | HIMB5_RS01265 | Not Available | Positive | 246273 - 247037 | 30229.8 |
| sam-dependent methyltransferase | HIMB5_RS01270 | Not Available | Positive | 247037 - 248215 | 45485.2 |
| duf3833 domain-containing protein | HIMB5_RS01275 | Not Available | Positive | 248218 - 248766 | 20784.0 |
| sdr family nad(p)-dependent oxidoreductase | HIMB5_RS01280 | Not Available | Negative | 248767 - 249528 | 29046.2 |
| tspo/mbr family protein | HIMB5_RS01285 | Not Available | Positive | 249550 - 250017 | 18297.4 |
| nad(p)/fad-dependent oxidoreductase | HIMB5_RS01290 | Not Available | Positive | 250020 - 251123 | 40935.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
