Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | HIMB5_RS00945 | Not Available | Positive | 179526 - 180536 | 38646.1 |
| hypothetical protein | HIMB5_RS00950 | Not Available | Positive | 180533 - 180841 | 12216.9 |
| peptidoglycan d,d-transpeptidase ftsi family protein | HIMB5_RS00955 | Not Available | Positive | 180828 - 182516 | 64409.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | HIMB5_RS00960 | Not Available | Positive | 182519 - 185380 | 108750.0 |
| 30s ribosomal protein s16 | HIMB5_RS00965 | Not Available | Positive | 185370 - 186456 | 42206.8 |
| 30s ribosomal protein s16 | HIMB5_RS00970 | Not Available | Positive | 186463 - 187749 | 50107.7 |
| ftsw/roda/spove family cell cycle protein | HIMB5_RS00975 | Not Available | Positive | 187727 - 188854 | 42915.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | HIMB5_RS00980 | Not Available | Positive | 188851 - 189912 | 41183.4 |
| udp-n-acetylmuramate--l-alanine ligase | HIMB5_RS00985 | Not Available | Positive | 189902 - 191296 | 52351.2 |
| udp-n-acetylmuramate dehydrogenase | HIMB5_RS00990 | Not Available | Positive | 191296 - 192204 | 34241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
