Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | HIMB5_RS00055 | Not Available | Positive | 10703 - 11086 | 14491.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | HIMB5_RS00060 | Not Available | Positive | 11086 - 11409 | 12167.3 |
| succinate dehydrogenase flavoprotein subunit | HIMB5_RS00065 | Not Available | Positive | 11406 - 13181 | 65073.2 |
| succinate dehydrogenase iron-sulfur subunit | HIMB5_RS00070 | Not Available | Positive | 13181 - 13960 | 29396.2 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | HIMB5_RS00075 | Not Available | Positive | 14003 - 15496 | 53968.2 |
| malate dehydrogenase | HIMB5_RS00080 | Not Available | Positive | 15512 - 16474 | 34357.9 |
| adp-forming succinate--coa ligase subunit beta | HIMB5_RS00085 | Not Available | Positive | 16474 - 17634 | 42153.9 |
| succinate--coa ligase subunit alpha | HIMB5_RS00090 | Not Available | Positive | 17634 - 18509 | 30533.2 |
| 2-oxoglutarate dehydrogenase e1 component | HIMB5_RS00095 | Not Available | Positive | 18544 - 21435 | 109818.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | HIMB5_RS00100 | Not Available | Positive | 21442 - 22728 | 47490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
