Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | HIMB5_RS00755 | Not Available | Positive | 142909 - 143424 | 19147.9 |
| cytochrome b | HIMB5_RS00760 | Not Available | Positive | 143432 - 144697 | 47716.4 |
| cytochrome c1 | HIMB5_RS00765 | Not Available | Positive | 144700 - 145470 | 28834.6 |
| redox-regulated atpase ychf | HIMB5_RS00770 | Not Available | Negative | 145447 - 146520 | 39975.8 |
| aminoacyl-trna hydrolase | HIMB5_RS00775 | Not Available | Negative | 146520 - 147080 | 20761.1 |
| 50s ribosomal protein l25/general stress protein ctc | HIMB5_RS00780 | Not Available | Negative | 147116 - 147829 | 25601.6 |
| ribose-phosphate pyrophosphokinase | HIMB5_RS00785 | Not Available | Negative | 147875 - 148807 | 33742.4 |
| peptidoglycan editing factor pgef | HIMB5_RS00790 | Not Available | Negative | 148807 - 149574 | 29262.9 |
| sam-dependent methyltransferase | HIMB5_RS07185 | Not Available | Negative | 149576 - 150175 | 23763.4 |
| sam-dependent methyltransferase | HIMB5_RS07190 | Not Available | Negative | 150205 - 150618 | 16006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
