Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | HIMB5_RS00705 | Not Available | Negative | 134664 - 135734 | 41074.3 |
| ribonuclease hii | HIMB5_RS00710 | Not Available | Negative | 135854 - 136414 | 20903.2 |
| uracil-dna glycosylase | HIMB5_RS00715 | Not Available | Negative | 136414 - 137133 | 27530.5 |
| tetratricopeptide repeat protein | HIMB5_RS00720 | Not Available | Positive | 137110 - 138831 | 68292.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | HIMB5_RS00725 | Not Available | Positive | 138833 - 139678 | 31987.0 |
| Trna-gln | Not Available | Not Available | Positive | 139712 - 139785 | Not Available |
| cca trna nucleotidyltransferase | HIMB5_RS00735 | Not Available | Positive | 139789 - 141063 | 49928.4 |
| transcription elongation factor grea | HIMB5_RS00740 | Not Available | Negative | 141060 - 141536 | 17778.3 |
| oxygen-dependent coproporphyrinogen oxidase | HIMB5_RS00745 | Not Available | Negative | 141538 - 142365 | 32328.0 |
| trna (cytidine(34)-2'-o)-methyltransferase | HIMB5_RS00750 | Not Available | Negative | 142365 - 142814 | 17010.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
