Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4198 domain-containing protein | HIMB5_RS07120 | Not Available | Positive | 1332207 - 1333001 | 31110.5 |
| trap transporter substrate-binding protein | HIMB5_RS07125 | Not Available | Positive | 1333127 - 1334287 | 42584.4 |
| trap transporter small permease subunit | HIMB5_RS07130 | Not Available | Positive | 1334382 - 1334972 | 22276.1 |
| trap transporter large permease subunit | HIMB5_RS07135 | Not Available | Positive | 1334962 - 1336323 | 50231.8 |
| amidase | HIMB5_RS07140 | Not Available | Positive | 1336335 - 1337663 | 49164.7 |
| hypothetical protein | HIMB5_RS07145 | Not Available | Positive | 1337663 - 1337842 | 6656.73 |
| dmt family transporter | HIMB5_RS07150 | Not Available | Positive | 1337914 - 1338759 | 31768.5 |
| alpha/beta hydrolase | HIMB5_RS07155 | Not Available | Positive | 1338743 - 1339561 | 31710.6 |
| signal recognition particle-docking protein ftsy | HIMB5_RS07160 | Not Available | Negative | 1339563 - 1340480 | 33737.9 |
| diaminopimelate epimerase | HIMB5_RS07165 | Not Available | Negative | 1340480 - 1341304 | 30072.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
