Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcf | HIMB5_RS07070 | Not Available | Positive | 1320979 - 1322268 | 48769.6 |
| 2-hydroxyacid dehydrogenase | HIMB5_RS07075 | Not Available | Positive | 1322276 - 1323229 | 34836.0 |
| mfs transporter | HIMB5_RS07080 | Not Available | Positive | 1323236 - 1324447 | 44733.9 |
| gaf domain-containing protein | HIMB5_RS07085 | Not Available | Negative | 1324444 - 1325532 | 40496.9 |
| nad(p)-dependent alcohol dehydrogenase | HIMB5_RS07090 | Not Available | Positive | 1325673 - 1326734 | 38138.4 |
| extracellular solute-binding protein | HIMB5_RS07095 | Not Available | Positive | 1326753 - 1328291 | 57181.6 |
| carbohydrate abc transporter permease | HIMB5_RS07100 | Not Available | Positive | 1328363 - 1329226 | 32844.4 |
| carbohydrate abc transporter permease | HIMB5_RS07105 | Not Available | Positive | 1329230 - 1330078 | 31637.4 |
| abc transporter atp-binding protein | HIMB5_RS07110 | Not Available | Positive | 1330078 - 1331157 | 40501.5 |
| abc transporter atp-binding protein | HIMB5_RS07115 | Not Available | Positive | 1331150 - 1332223 | 40209.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
