Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmd | HIMB5_RS07020 | Not Available | Positive | 1311988 - 1312215 | 8480.28 |
| cytochrome c maturation protein ccme | HIMB5_RS07025 | Not Available | Positive | 1312224 - 1312643 | 16051.9 |
| heme lyase ccmf/nrfe family subunit | HIMB5_RS07030 | Not Available | Positive | 1312645 - 1314525 | 72228.4 |
| dsbe family thiol:disulfide interchange protein | HIMB5_RS07035 | Not Available | Positive | 1314515 - 1315033 | 20186.5 |
| cytochrome c-type biogenesis protein ccmh | HIMB5_RS07040 | Not Available | Positive | 1315030 - 1315386 | 13706.9 |
| acyloxyacyl hydrolase | HIMB5_RS07045 | Not Available | Positive | 1315407 - 1315919 | 18869.4 |
| alpha-hydroxy acid oxidase | HIMB5_RS07050 | Not Available | Positive | 1315929 - 1317080 | 42604.3 |
| pyridoxal phosphate-dependent aminotransferase | HIMB5_RS07055 | Not Available | Positive | 1317084 - 1318247 | 42923.7 |
| fad-linked oxidase c-terminal domain-containing protein | HIMB5_RS07060 | Not Available | Positive | 1318252 - 1319745 | 53990.4 |
| fad-binding protein | HIMB5_RS07065 | Not Available | Positive | 1319699 - 1320979 | 48057.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
