Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | HIMB5_RS06675 | Not Available | Negative | 1254781 - 1256652 | 69789.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | HIMB5_RS06680 | Not Available | Negative | 1256720 - 1258054 | 49917.2 |
| transcription termination factor rho | HIMB5_RS06685 | Not Available | Negative | 1258155 - 1259423 | 47168.2 |
| protoporphyrinogen oxidase hemj | HIMB5_RS06690 | Not Available | Negative | 1259488 - 1259919 | 16836.4 |
| ferrochelatase | HIMB5_RS07300 | Not Available | Negative | 1259912 - 1260946 | 39433.6 |
| uroporphyrinogen decarboxylase | HIMB5_RS07305 | Not Available | Negative | 1260947 - 1261948 | 38659.4 |
| pyruvate, water dikinase regulatory protein | HIMB5_RS06705 | Not Available | Positive | 1262210 - 1263040 | 31616.9 |
| maf family protein | HIMB5_RS06710 | Not Available | Positive | 1263033 - 1263623 | 22111.5 |
| shikimate dehydrogenase | HIMB5_RS06715 | Not Available | Positive | 1263616 - 1264413 | 30136.4 |
| dephospho-coa kinase | HIMB5_RS06720 | Not Available | Positive | 1264406 - 1264993 | 23122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
