Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | HIMB5_RS06580 | Not Available | Negative | 1237456 - 1238058 | 23038.5 |
| nucleotide exchange factor grpe | HIMB5_RS06585 | Not Available | Positive | 1238095 - 1238727 | 24102.1 |
| molecular chaperone dnak | HIMB5_RS06590 | Not Available | Positive | 1238789 - 1240714 | 69370.4 |
| molecular chaperone dnaj | HIMB5_RS06595 | Not Available | Positive | 1240743 - 1241870 | 41047.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | HIMB5_RS06600 | Not Available | Positive | 1241913 - 1242689 | 29199.4 |
| endonuclease iii | HIMB5_RS06605 | Not Available | Positive | 1242689 - 1243342 | 25146.4 |
| adenosine kinase | HIMB5_RS06610 | Not Available | Positive | 1243342 - 1244268 | 34088.1 |
| alternative ribosome rescue factor arfa | HIMB5_RS07370 | Not Available | Negative | 1244265 - 1244369 | 4001.17 |
| winged helix-turn-helix domain-containing protein | HIMB5_RS06615 | Not Available | Negative | 1244366 - 1244920 | 22225.7 |
| l,d-transpeptidase | HIMB5_RS06620 | Not Available | Positive | 1244924 - 1245415 | 18992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
