Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m22 | HIMB5_RS06530 | Not Available | Negative | 1226845 - 1227231 | 15024.0 |
| polysaccharide deacetylase family protein | HIMB5_RS06535 | Not Available | Positive | 1227317 - 1228237 | 36445.1 |
| glucosaminidase domain-containing protein | HIMB5_RS06540 | Not Available | Negative | 1228234 - 1229346 | 42733.4 |
| nifu family protein | HIMB5_RS06545 | Not Available | Negative | 1229346 - 1229885 | 20165.2 |
| tryptophan--trna ligase | HIMB5_RS06550 | Not Available | Negative | 1229934 - 1230938 | 37681.4 |
| murein biosynthesis integral membrane protein murj | HIMB5_RS06555 | Not Available | Negative | 1230945 - 1232474 | 57594.6 |
| nadp-dependent malic enzyme | HIMB5_RS06560 | Not Available | Positive | 1232546 - 1234837 | 83932.1 |
| bon domain-containing protein | HIMB5_RS06565 | Not Available | Negative | 1234834 - 1235427 | 22217.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | HIMB5_RS06570 | Not Available | Negative | 1235417 - 1236280 | 32649.1 |
| abc transporter substrate-binding protein | HIMB5_RS06575 | Not Available | Positive | 1236312 - 1237472 | 45337.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
