Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surf1 family protein | HIMB5_RS00605 | Not Available | Positive | 117370 - 118023 | 25943.4 |
| threonine synthase | HIMB5_RS00610 | Not Available | Positive | 118024 - 119406 | 52247.2 |
| peroxiredoxin | HIMB5_RS00615 | Not Available | Positive | 119403 - 119888 | 17617.2 |
| ribonuclease hi | HIMB5_RS00620 | Not Available | Negative | 119880 - 120308 | 16296.2 |
| homoserine kinase | HIMB5_RS00625 | Not Available | Negative | 120308 - 121276 | 37886.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HIMB5_RS00630 | Not Available | Negative | 121277 - 122221 | 35190.4 |
| brp/blh family beta-carotene 15,15'-dioxygenase | HIMB5_RS00635 | Not Available | Negative | 122202 - 123146 | 37010.3 |
| lycopene cyclase family protein | HIMB5_RS00640 | Not Available | Negative | 123148 - 124215 | 41929.6 |
| squalene/phytoene synthase family protein | HIMB5_RS00645 | Not Available | Negative | 124202 - 125047 | 33011.9 |
| phytoene desaturase family protein | HIMB5_RS00650 | Not Available | Negative | 125044 - 126501 | 55615.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
