Alpha proteobacterium HIMB5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Alpha proteobacterium HIMB5 is characterized by possessing a single replicon, which is crucial for its genomic stability and replication processes. The genomic information for HIMB5 is cataloged under the accession number NC_018643.1, indicating its identification in genomic databases. As an organism within the alpha subclass of proteobacteria, HIMB5 can be positioned within a diverse group of bacteria that are often involved in a variety of ecological roles, including those related to nutrient cycling and symbiotic relationships. The traits associated with this organism suggest it may contribute to its surrounding environment, possibly influencing microbial community dynamics. While specific metabolic pathways or ecological functions of HIMB5 are not detailed in the provided data, the presence of a single replicon suggests that the organism may have streamlined genetic processes, potentially enhancing its adaptability to specific ecological niches. This trait could be advantageous in fluctuating environmental conditions, allowing HIMB5 to maintain stability in its genetic material while adapting to various ecological pressures. In summary, Alpha proteobacterium HIMB5, with its single replicon and genomic identification NC_018643.1, exemplifies the characteristics that may enable it to thrive in diverse environments, contributing to ecological processes and interactions within microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium HIMB5, complete sequence.

Gene Summary

Adenine Count

476776 bp

Thymine Count

481842 bp

Guanine Count

191230 bp

Cytosine Count

193354 bp

Genome Length

1343202 bp

Protein-coding Genes

1405 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argjHIMB5_RS05640Not AvailableNegative1059677 - 106097848228.7
preprotein translocase subunit secaHIMB5_RS05645Not AvailablePositive1061044 - 106360297843.1
acetyl-coa carboxylase carboxyltransferase subunit alphaHIMB5_RS05650Not AvailableNegative1063597 - 106470941136.6
malate synthase gHIMB5_RS05655Not AvailablePositive1064799 - 106696181413.5
recombination mediator recrHIMB5_RS05660Not AvailableNegative1066948 - 106755922351.0
ybab/ebfc family nucleoid-associated proteinHIMB5_RS05665Not AvailableNegative1067563 - 106788011596.0
dna polymerase iii subunit gamma/tauHIMB5_RS05670Not AvailableNegative1067883 - 106954763813.1
prephenate dehydrataseHIMB5_RS05675Not AvailableNegative1069685 - 107051831313.3
3-deoxy-manno-octulosonate cytidylyltransferaseHIMB5_RS05680Not AvailableNegative1070520 - 107125127631.2
c-type cytochromeHIMB5_RS05685Not AvailablePositive1071342 - 107188119341.8

Displaying genes 1131 – 1140 of 1442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.