Alpha proteobacterium HIMB5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Alpha proteobacterium HIMB5 is characterized by possessing a single replicon, which is crucial for its genomic stability and replication processes. The genomic information for HIMB5 is cataloged under the accession number NC_018643.1, indicating its identification in genomic databases. As an organism within the alpha subclass of proteobacteria, HIMB5 can be positioned within a diverse group of bacteria that are often involved in a variety of ecological roles, including those related to nutrient cycling and symbiotic relationships. The traits associated with this organism suggest it may contribute to its surrounding environment, possibly influencing microbial community dynamics. While specific metabolic pathways or ecological functions of HIMB5 are not detailed in the provided data, the presence of a single replicon suggests that the organism may have streamlined genetic processes, potentially enhancing its adaptability to specific ecological niches. This trait could be advantageous in fluctuating environmental conditions, allowing HIMB5 to maintain stability in its genetic material while adapting to various ecological pressures. In summary, Alpha proteobacterium HIMB5, with its single replicon and genomic identification NC_018643.1, exemplifies the characteristics that may enable it to thrive in diverse environments, contributing to ecological processes and interactions within microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alpha proteobacterium HIMB5, complete sequence.

Gene Summary

Adenine Count

476776 bp

Thymine Count

481842 bp

Guanine Count

191230 bp

Cytosine Count

193354 bp

Genome Length

1343202 bp

Protein-coding Genes

1405 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-ileNot AvailableNot AvailablePositive1050521 - 1050597Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive1050695 - 1052172Not Available
m23 family metallopeptidaseHIMB5_RS05600Not AvailablePositive1052495 - 105378749342.9
duf4167 domain-containing proteinHIMB5_RS05605Not AvailableNegative1053784 - 105417315086.4
30s ribosomal protein s16HIMB5_RS05610Not AvailableNegative1054180 - 105502031307.1
peptide chain release factor 1HIMB5_RS05615Not AvailableNegative1055017 - 105608740432.9
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseHIMB5_RS05620Not AvailableNegative1056095 - 105719539770.2
aspartate kinaseHIMB5_RS05625Not AvailableNegative1057202 - 105841944377.4
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigHIMB5_RS05630Not AvailablePositive1058492 - 105921427525.7
duf1178 family proteinHIMB5_RS05635Not AvailableNegative1059211 - 105963616616.9

Displaying genes 1121 – 1130 of 1442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.