Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | /taxonomy?family=Candidatus+Pelagibacteraceae&kingdom=Pseudomonadati&klass=Alphaproteobacteria&level=genus&order=Candidatus+Pelagibacterales&phylum=Pseudomonadota |
| Species | alpha proteobacterium HIMB5 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476776 bp
Thymine Count
481842 bp
Guanine Count
191230 bp
Cytosine Count
193354 bp
Genome Length
1343202 bp
Protein-coding Genes
1405 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | HIMB5_RS05540 | Not Available | Negative | 1040216 - 1042252 | 78408.2 |
| aldo/keto reductase | HIMB5_RS05545 | Not Available | Negative | 1042249 - 1043037 | 31015.9 |
| pseudaminic acid synthase | HIMB5_RS05550 | Not Available | Negative | 1043095 - 1044141 | 39851.0 |
| phytanoyl-coa dioxygenase family protein | HIMB5_RS05555 | Not Available | Negative | 1044134 - 1044949 | 31891.6 |
| class i sam-dependent methyltransferase | HIMB5_RS05560 | Not Available | Negative | 1044952 - 1045833 | 33665.1 |
| wbqc family protein | HIMB5_RS05565 | Not Available | Negative | 1045830 - 1046516 | 27088.8 |
| formyltransferase family protein | HIMB5_RS07235 | Not Available | Negative | 1046528 - 1047127 | 23261.9 |
| hypothetical protein | HIMB5_RS05575 | Not Available | Negative | 1047297 - 1047503 | 8083.32 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1047547 - 1050304 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1050435 - 1050510 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
