Methylocystis sp. SC2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylocystaceae

Genus

Methylocystis

Description

Methylocystis sp. SC2 is a Gram-negative bacterium characterized by having a single replicon. This organism is notable for its role in methanotrophy, where it utilizes methane as a carbon and energy source. The strain has been cataloged with the accession number NC_018485.1, which provides a reference for genomic studies. As a member of the Methylocystis genus, Methylocystis sp. SC2 contributes to the biogeochemical cycling of carbon, particularly in environments rich in methane, such as wetlands and landfills. By oxidizing methane, this bacterium plays a significant role in mitigating greenhouse gas emissions, making it an important organism in ecological and environmental contexts. Understanding the traits of Methylocystis sp. SC2 enhances our knowledge of microbial processes that influence atmospheric composition and climate change. Its ability to thrive in methane-rich environments underscores the potential for utilizing such microorganisms in biotechnological applications aimed at reducing methane emissions and harnessing energy from this potent greenhouse gas.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylocystaceae
GenusMethylocystis
SpeciesMethylocystis hydrogenophila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylocystis sp. SC2


Gene Summary

Adenine Count

691132 bp

Thymine Count

691654 bp

Guanine Count

1196521 bp

Cytosine Count

1194137 bp

Genome Length

3773444 bp

Protein-coding Genes

3582 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter periplasmic protein lptcBN69_RS16790Not AvailablePositive3474351 - 347505525454.6
lipopolysaccharide transport periplasmic protein lptaBN69_RS16795Not AvailablePositive3475056 - 347558618355.0
lytic transglycosylase domain-containing proteinBN69_RS16800Not AvailableNegative3475598 - 347609517997.3
duf3175 domain-containing proteinBN69_RS16805Not AvailablePositive3476266 - 347659512333.6
type ii toxin-antitoxin system phd/yefm family antitoxinBN69_RS16810Not AvailablePositive3476740 - 34769949609.66
type ii toxin-antitoxin system vapc family toxinBN69_RS16815Not AvailablePositive3476991 - 347741615260.3
lysm peptidoglycan-binding domain-containing proteinBN69_RS19675Not AvailablePositive3477457 - 34775945351.47
abrb/maze/spovt family dna-binding domain-containing proteinBN69_RS16820Not AvailablePositive3477666 - 34779389772.8
type ii toxin-antitoxin system vapc family toxinBN69_RS16825Not AvailablePositive3477935 - 347833314771.7
type ii toxin-antitoxin system phd/yefm family antitoxinBN69_RS19900Not AvailablePositive3478391 - 34786068223.13

Displaying genes 3371 – 3380 of 3669 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.