Methylocystis sp. SC2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylocystaceae

Genus

Methylocystis

Description

Methylocystis sp. SC2 is a Gram-negative bacterium characterized by having a single replicon. This organism is notable for its role in methanotrophy, where it utilizes methane as a carbon and energy source. The strain has been cataloged with the accession number NC_018485.1, which provides a reference for genomic studies. As a member of the Methylocystis genus, Methylocystis sp. SC2 contributes to the biogeochemical cycling of carbon, particularly in environments rich in methane, such as wetlands and landfills. By oxidizing methane, this bacterium plays a significant role in mitigating greenhouse gas emissions, making it an important organism in ecological and environmental contexts. Understanding the traits of Methylocystis sp. SC2 enhances our knowledge of microbial processes that influence atmospheric composition and climate change. Its ability to thrive in methane-rich environments underscores the potential for utilizing such microorganisms in biotechnological applications aimed at reducing methane emissions and harnessing energy from this potent greenhouse gas.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylocystaceae
GenusMethylocystis
SpeciesMethylocystis hydrogenophila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylocystis sp. SC2 chromosome I, complete sequence.

Gene Summary

Adenine Count

691132 bp

Thymine Count

691654 bp

Guanine Count

1196521 bp

Cytosine Count

1194137 bp

Genome Length

3773444 bp

Protein-coding Genes

3582 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 3 n-terminal domain-containing proteinBN69_RS09390Not AvailablePositive1938167 - 194029675789.1
alpha-amylase family glycosyl hydrolaseBN69_RS09395Not AvailablePositive1940315 - 194190159671.2
lysm peptidoglycan-binding domain-containing proteinBN69_RS19830Not AvailableNegative1942008 - 194256920050.8
hypothetical proteinBN69_RS09405Not AvailableNegative1943023 - 194329510345.3
recombinase family proteinBN69_RS18785Not AvailablePositive1943227 - 194485559644.4
Trna-metNot AvailableNot AvailablePositive1944812 - 1944888Not Available
avast type 3 anti-phage proein avs3bBN69_RS09425Not AvailableNegative1945534 - 194625326502.2
avast type 3 anti-phage nuclease/atpase avs3aBN69_RS09430Not AvailableNegative1946261 - 1952554233927.0
conjugal transfer protein tradBN69_RS09435Not AvailableNegative1952855 - 195313610700.7
conjugal transfer protein tradBN69_RS09440Not AvailableNegative1953138 - 195346411275.2

Displaying genes 1891 – 1900 of 3669 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.