Actinoplanes sp. SE50/110

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micromonosporales

Family

Micromonosporaceae

Genus

Actinoplanes

Description

Actinoplanes sp. SE50/110 is a Gram-positive bacterium notable for its single replicon, with its genomic information accessible under the accession number NC_017803.1. As a member of the Actinobacteria phylum, this organism is likely to exhibit characteristics typical of this group, such as the production of secondary metabolites and a complex life cycle involving the formation of spores. The classification as Gram-positive indicates that Actinoplanes sp. SE50/110 possesses a thick peptidoglycan layer in its cell wall, which is a critical feature that can influence its susceptibility to antibiotics and its overall ecological interactions. Gram-positive bacteria, including those in the Actinoplanes genus, are often found in soil and other terrestrial environments, where they play significant roles in nutrient cycling and organic matter decomposition. The single replicon characteristic suggests a streamlined genomic organization, which may be advantageous for efficient replication and regulation of essential cellular processes. This can provide insights into the organism's adaptability and survival strategies in its ecological niche. In summary, Actinoplanes sp. SE50/110 is a Gram-positive bacterium with a single replicon, and its genomic data can enhance our understanding of its biological functions and potential applications in biotechnology or agriculture. Its ecological role is likely significant, contributing to soil health and the cycling of nutrients, reflecting the importance of Actinobacteria in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicromonosporales
FamilyMicromonosporaceae
GenusActinoplanes
SpeciesActinoplanes sp. SE50/110
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinoplanes sp. SE50/110


Gene Summary

Adenine Count

1328228 bp

Thymine Count

1322017 bp

Guanine Count

3296037 bp

Cytosine Count

3293569 bp

Genome Length

9239851 bp

Protein-coding Genes

8310 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinACPL_RS02735Not AvailableNegative625143 - 62633040825.0
sige family rna polymerase sigma factorACPL_RS02740Not AvailableNegative626340 - 62684319108.1
hypothetical proteinACPL_RS46410Not AvailablePositive626969 - 62839650711.2
Trna-aspNot AvailableNot AvailablePositive628439 - 628512Not Available
paqr family membrane homeostasis protein trhaACPL_RS02755Not AvailableNegative628521 - 62917422950.5
histoneACPL_RS02760Not AvailablePositive629453 - 63005217818.2
diguanylate cyclaseACPL_RS02765Not AvailableNegative630127 - 63174959173.9
m36 family metallopeptidaseACPL_RS02770Not AvailablePositive632135 - 63498498326.5
sensor domain-containing diguanylate cyclaseACPL_RS02775Not AvailableNegative635054 - 63663157053.4
hypothetical proteinACPL_RS02780Not AvailableNegative636836 - 63784035470.2

Displaying genes 551 – 560 of 8431 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

11 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0017610N-Acetylmuramate 6-phosphateC11H19NO11PChemical structure of N-Acetylmuramate 6-phosphateNULL
Average372.2424Da
Monoisotopic372.069571967Da
BASm0020080Sedoheptulose 7-phosphateC7H15O10PChemical structure of Sedoheptulose 7-phosphate2646-35-7
Average290.1618Da
Monoisotopic290.040283212Da
BASm0034607dTDP-4-oxo-6-deoxy-D-glucoseC16H24N2O15P2Chemical structure of dTDP-4-oxo-6-deoxy-D-glucose16752-71-9
Average546.3137Da
Monoisotopic546.065191132Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039930Aggregatibacter aphrophilus NJ8700Not available365-08-2Not available

Displaying 1–10 of 11 metabolites

Health Effects

No health effects information available for this bacterium.