Helicobacter cetorum MIT 00-7128

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cetorum MIT 00-7128 is characterized by having two replicons, which indicates a complex genomic architecture that may contribute to its adaptability in various environments. The organism's genomic information is represented in two primary accessions: NC_017737.1 and NC_017738.1. The replicon structure of H. cetorum may suggest a potential for distinct regulatory mechanisms or functional specialization, which could play a role in its survival and interaction with hosts or environmental niches. Such genomic characteristics are often associated with increased flexibility in response to environmental changes, potentially allowing H. cetorum to thrive in specific habitats. Biologically, Helicobacter species, including H. cetorum, are known to inhabit the gastrointestinal tracts of various hosts, including marine mammals. This ecological niche is significant as it indicates their role in the microbial ecosystem of these hosts, potentially influencing digestion and overall health. The distinct genomic traits of H. cetorum may provide insights into its metabolic capabilities and interactions within the microbiome of its host, contributing to our understanding of host-microbe relationships in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cetorum
StrainMIT 00-7128

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cetorum MIT 00-7128
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cetorum MIT 00-7128


Gene Summary

Adenine Count

638062 bp

Thymine Count

636967 bp

Guanine Count

334236 bp

Cytosine Count

338381 bp

Genome Length

1947646 bp

Protein-coding Genes

1740 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
menaquinone biosynthesis family proteinHCW_RS02955Not AvailableNegative605055 - 60591833006.2
Dna strand exchange and recombination protein with protease and nuclease activityHCW_RS02960Not AvailablePositive606016 - 60705937622.8
EnolaseHCW_RS02965Not AvailablePositive607100 - 60838046680.8
transcription antitermination factor nusbHCW_RS00005Not AvailableNegative17 - 42715350.7
6,7-dimethyl-8-ribityllumazine synthaseHCW_RS00010Not AvailableNegative429 - 89917059.8
3-deoxy-8-phosphooctulonate synthaseHCW_RS00015Not AvailableNegative932 - 174729781.1
carbonic anhydraseHCW_RS00020Not AvailableNegative1744 - 240625683.1
orotidine-5'-phosphate decarboxylaseHCW_RS00025Not AvailablePositive2534 - 321725437.9
pantoate--beta-alanine ligaseHCW_RS00030Not AvailablePositive3219 - 404931391.4
nadph dehydrogenaseHCW_RS00035Not AvailablePositive4257 - 527637580.6

Displaying genes 21 – 30 of 1815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.