Helicobacter cetorum MIT 00-7128

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cetorum MIT 00-7128 is characterized by having two replicons, which indicates a complex genomic architecture that may contribute to its adaptability in various environments. The organism's genomic information is represented in two primary accessions: NC_017737.1 and NC_017738.1. The replicon structure of H. cetorum may suggest a potential for distinct regulatory mechanisms or functional specialization, which could play a role in its survival and interaction with hosts or environmental niches. Such genomic characteristics are often associated with increased flexibility in response to environmental changes, potentially allowing H. cetorum to thrive in specific habitats. Biologically, Helicobacter species, including H. cetorum, are known to inhabit the gastrointestinal tracts of various hosts, including marine mammals. This ecological niche is significant as it indicates their role in the microbial ecosystem of these hosts, potentially influencing digestion and overall health. The distinct genomic traits of H. cetorum may provide insights into its metabolic capabilities and interactions within the microbiome of its host, contributing to our understanding of host-microbe relationships in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cetorum
StrainMIT 00-7128

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cetorum MIT 00-7128
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cetorum MIT 00-7128, complete sequence.

Gene Summary

Adenine Count

638062 bp

Thymine Count

636967 bp

Guanine Count

334236 bp

Cytosine Count

338381 bp

Genome Length

1947646 bp

Protein-coding Genes

1740 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
superoxide dismutaseHCW_RS07760Not AvailableNegative1688230 - 168887124701.0
fkbm family methyltransferaseHCW_RS07765Not AvailableNegative1689063 - 168961421011.2
hypothetical proteinHCW_RS07770Not AvailableNegative1689626 - 168991311430.4
Trna-alaNot AvailableNot AvailablePositive1690131 - 1690206Not Available
Trna-ileNot AvailableNot AvailablePositive1690228 - 1690304Not Available
udp-glucose 4-epimerase galeHCW_RS07785Not AvailablePositive1690413 - 169144738949.8
trna pseudouridine(38-40) synthase truaHCW_RS07790Not AvailableNegative1691441 - 169216927315.4
lptf/lptg family permeaseHCW_RS07795Not AvailableNegative1692170 - 169320739729.2
protein-l-isoaspartate o-methyltransferaseHCW_RS07800Not AvailableNegative1693226 - 169385523787.2
ribonucleotide-diphosphate reductase subunit betaHCW_RS07805Not AvailableNegative1693865 - 169489039555.1

Displaying genes 1571 – 1580 of 1815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.