Helicobacter cetorum MIT 00-7128

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cetorum MIT 00-7128 is characterized by having two replicons, which indicates a complex genomic architecture that may contribute to its adaptability in various environments. The organism's genomic information is represented in two primary accessions: NC_017737.1 and NC_017738.1. The replicon structure of H. cetorum may suggest a potential for distinct regulatory mechanisms or functional specialization, which could play a role in its survival and interaction with hosts or environmental niches. Such genomic characteristics are often associated with increased flexibility in response to environmental changes, potentially allowing H. cetorum to thrive in specific habitats. Biologically, Helicobacter species, including H. cetorum, are known to inhabit the gastrointestinal tracts of various hosts, including marine mammals. This ecological niche is significant as it indicates their role in the microbial ecosystem of these hosts, potentially influencing digestion and overall health. The distinct genomic traits of H. cetorum may provide insights into its metabolic capabilities and interactions within the microbiome of its host, contributing to our understanding of host-microbe relationships in marine environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cetorum
StrainMIT 00-7128

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cetorum MIT 00-7128
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cetorum MIT 00-7128, complete sequence.

Gene Summary

Adenine Count

638062 bp

Thymine Count

636967 bp

Guanine Count

334236 bp

Cytosine Count

338381 bp

Genome Length

1947646 bp

Protein-coding Genes

1740 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii-a crispr-associated protein cas10/csm1HCW_RS07115Not AvailablePositive1553380 - 155503264954.8
type iii-a crispr-associated protein csm2HCW_RS07120Not AvailablePositive1555025 - 155568125576.9
type iii-a crispr-associated ramp protein csm3HCW_RS07125Not AvailablePositive1555707 - 155674738898.5
type iii-a crispr-associated ramp protein csm4HCW_RS07130Not AvailablePositive1556749 - 155765434865.2
type iii-a crispr-associated ramp protein csm5HCW_RS07135Not AvailablePositive1557657 - 155884446956.1
tm1812 family crispr-associated proteinHCW_RS07140Not AvailablePositive1558857 - 156035958808.6
hypothetical proteinHCW_RS07145Not AvailableNegative1560547 - 15607596937.41
hypothetical proteinHCW_RS07150Not AvailableNegative1561088 - 156153717872.2
hypothetical proteinHCW_RS07155Not AvailableNegative1561547 - 156198116293.0
hypothetical proteinHCW_RS07160Not AvailableNegative1562335 - 156261010421.9

Displaying genes 1441 – 1450 of 1815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.