Escherichia coli O83:H1 str. NRG 857C

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O83:H1 str. NRG 857C is a Gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. It exhibits a typical arrangement of cells in pairs and singles, which is common among members of the Enterobacteriaceae family. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is 37°C, placing it within the mesophilic temperature range. E. coli O83:H1 str. NRG 857C has two replicons and is surrounded by two membranes, consistent with its classification as a Gram-negative organism. The strain is known to be free-living, indicating that it can exist independently in various environments, although it is also host-associated, suggesting a potential connection to animal or human hosts. The dual capability of E. coli O83:H1 str. NRG 857C to adapt to differing oxygen levels and its optimal growth at body temperature highlight its potential role in various ecological niches, particularly in association with warm-blooded hosts. This adaptability may contribute to its survival and proliferation within diverse habitats, underscoring the ecological significance of such bacteria in both human health and environmental microbiology. Accessions for this strain can be found in genomic databases under NC_017634.1 and NC_017659.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO83:H1 NRG 857C

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O83:H1 str. NRG 857C
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O83:H1 str. NRG 857C, complete sequence.

Gene Summary

Adenine Count

1171510 bp

Thymine Count

1170099 bp

Guanine Count

1202162 bp

Cytosine Count

1204045 bp

Genome Length

4747819 bp

Protein-coding Genes

4302 genes

Non-Coding Genes

306 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yaeq family proteinNRG857_RS00975Not AvailablePositive218404 - 21894920847.7
alternative ribosome rescue aminoacyl-trna hydrolase arfbNRG857_RS00980Not AvailablePositive218946 - 21936815611.9
envelope stress response activation lipoprotein nlpeNRG857_RS00985Not AvailablePositive219382 - 22009225826.7
yaef family permuted papain-like enzymeNRG857_RS00990Not AvailableNegative220248 - 22107229900.0
proline--trna ligaseNRG857_RS00995Not AvailableNegative221125 - 22284363606.2
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoNRG857_RS01000Not AvailableNegative222954 - 22366126378.9
rcs stress response system protein rcsfNRG857_RS01005Not AvailableNegative223658 - 22406214164.3
methionine abc transporter substrate-binding lipoprotein metqNRG857_RS01010Not AvailableNegative224180 - 22499529433.3
methionine abc transporter permease metiNRG857_RS01015Not AvailableNegative225035 - 22568823257.6
methionine abc transporter atp-binding protein metnNRG857_RS01020Not AvailableNegative225681 - 22671237864.7

Displaying genes 431 – 440 of 4768 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.