Erwinia sp. Ejp617

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

Erwinia sp. Ejp617 is characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This species is notable for having four replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various environments. The organism is represented in the National Center for Biotechnology Information (NCBI) database with several accessions, specifically NC_017442.1, NC_017444.1, NC_017445.1, and NC_017446.1. These accessions provide a basis for further genomic and phylogenetic studies, allowing researchers to explore the genetic diversity and potential functional capabilities of Erwinia sp. Ejp617 in comparison to other members of the Erwinia genus. The presence of flagella suggests that Erwinia sp. Ejp617 may have enhanced motility, which could play a significant role in its ecological niche, possibly aiding in colonization of plant surfaces or other substrates. Overall, the unique combination of its rod shape, flagellar motility, and genomic characteristics might contribute to its ecological interactions and potential pathogenicity, although specific pathogenic effects have not been detailed in the provided data. Understanding these traits is essential for further investigations into the ecological significance and potential applications of Erwinia sp. Ejp617 within microbiology and plant sciences.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia sp. Ejp617
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Erwinia sp. Ejp617
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Erwinia sp. Ejp617 plasmid pJE05, complete sequence.

Gene Summary

Adenine Count

644 bp

Thymine Count

696 bp

Guanine Count

741 bp

Cytosine Count

610 bp

Genome Length

2691 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine/thiamine pyrophosphate abc transporter permease thipEJP617_RS01885Not AvailablePositive407141 - 40875158872.8
thiamine abc transporter atp-binding protein thiqEJP617_RS01890Not AvailablePositive408735 - 40944825866.7
deda family proteinEJP617_RS01895Not AvailableNegative409428 - 41018928432.9
dna polymerase iiEJP617_RS01900Not AvailablePositive410359 - 41272290000.6
rna polymerase-associated protein rapaEJP617_RS01905Not AvailablePositive412894 - 415803109606.0
bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rluaEJP617_RS01910Not AvailablePositive415845 - 41649824735.7
co-chaperone djlaEJP617_RS01915Not AvailableNegative416635 - 41745330584.1
lps assembly protein lptdEJP617_RS01920Not AvailablePositive417666 - 42004190248.9
peptidylprolyl isomerase suraEJP617_RS01925Not AvailablePositive420095 - 42139047307.5
4-hydroxythreonine-4-phosphate dehydrogenase pdxaEJP617_RS01930Not AvailablePositive421380 - 42237235253.8

Displaying genes 461 – 470 of 3664 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.